Iowa State University

Iowa State University

Protein-RNA Interface Database (PRIDB) v2.0

Dobbs and Honavar Laboratories

Query parameters:

PDB ID: 1DI2
Interaction definition: Distance-based, 5.0Å cutoff
Look up in the Protein Data Bank
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Query Results:

Minimize 1DI2
Show Jmol applet
1DI2: 2 protein chains, 4 RNA chains
Complex Name: CRYSTAL STRUCTURE OF A DSRNA-BINDING DOMAIN COMPLEXED WITH DSRNA: MOLECULAR BASIS OF DOUBLE-STRANDED RNA-PROTEIN INTERACTIONS
Resolution:1.9 Å
Solving Method:X-RAY DIFFRACTION

Interactions:


Prosite -

Chain: A, Molecule: DOUBLE STRANDED RNA BINDING PROTEIN A
M P V G S L Q E L A V Q K G W R L P E Y T V A Q E S G P P H K R E F T I T C R V E T F V E T G S G T S K Q V A K R V A A E K L L T K F K T
Prosite -

Chain: B, Molecule: DOUBLE STRANDED RNA BINDING PROTEIN A
M P V G S L Q E L A V Q K G W R L P E Y T V A Q F T I T C R V E T F V E T G S G T S K Q V A K R V A A E K L L T K F K T
Chain: C, Molecule: RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3')
G G C G C G C G C C
Chain: D, Molecule: RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3')
G G C G C G C G C C
Chain: E, Molecule: RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3')
G G C G C G C G C C
Chain: G, Molecule: RNA (5'-R(*GP*GP*CP*GP*CP*GP*CP*GP*CP*C)-3')
G G C G C G C G C C


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