Iowa State University

Iowa State University

Protein-RNA Interface Database (PRIDB) v2.0

Dobbs and Honavar Laboratories

Query parameters:

PDB ID: 1ASZ
Interaction definition: Distance-based, 5.0Å cutoff
Look up in the Protein Data Bank
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Query Results:

Minimize 1ASZ
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1ASZ: 2 protein chains, 2 RNA chains
Complex Name: THE ACTIVE SITE OF YEAST ASPARTYL-TRNA SYNTHETASE: STRUCTURAL AND FUNCTIONAL ASPECTS OF THE AMINOACYLATION REACTION
Resolution:3 Å
Solving Method:X-RAY DIFFRACTION

Interactions:


Prosite -

Chain: A, Molecule: ASPARTYL-tRNA SYNTHETASE
E D T A K D N Y G K L P L I Q S R D S D R T G Q K R V K F V D L D E A K D S D K E V L F R A R V H N T R Q Q G A T L A F L T L R Q Q A S L I Q G L V K A N K E G T I S K N M V K W A G S L N L E S I V L V R G I V K K V D E P I K S A T V Q N L E I H I T K I Y T I S E T P E A L P I L L E D A S R S E A E A E A A G L P V V N L D T R L D Y R V I D L R T V T N Q A I F R I Q A G V C E L F R E Y L A T K K F T E V H T P K L L G A P S E G G S S V F E V T Y F K G K A Y L A Q S P Q F N K Q Q L I V A D F E R V Y E I G P V F R A E N S N T H R H M T E F T G L D M E M A F E E H Y H E V L D T L S E L F V F I F S E L P K R F A H E I E L V R K Q Y P V E E F K L P K D G K M V R L T Y K E G I E M L R A A G K E I G D F E D L S T E N E K F L G K L V R D K Y D T D F Y I L D K F P L E I R P F Y T M P D P A N P K Y S N S Y D F F M R G E E I L S G A Q R I H D H A L L Q E R M K A H G L S P E D P G L K D Y C D G F S Y G C P P H A G G G I G L E R V V M F Y L D L K N I R R A S L F P R D P K R L R P
Prosite -

Chain: B, Molecule: ASPARTYL-tRNA SYNTHETASE
E D T A K D N Y G K L P L I Q S R D S D R T G Q K R V K F V D L D E A K D S D K E V L F R A R V H N T R Q Q G A T L A F L T L R Q Q A S L I Q G L V K A N K E G T I S K N M V K W A G S L N L E S I V L V R G I V K K V D E P I K S A T V Q N L E I H I T K I Y T I S E T P E A L P I L L E D A S R S E A E A E A A G L P V V N L D T R L D Y R V I D L R T V T N Q A I F R I Q A G V C E L F R E Y L A T K K F T E V H T P K L L G A P S E G G S S V F E V T Y F K G K A Y L A Q S P Q F N K Q Q L I V A D F E R V Y E I G P V F R A E N S N T H R H M T E F T G L D M E M A F E E H Y H E V L D T L S E L F V F I F S E L P K R F A H E I E L V R K Q Y P V E E F K L P K D G K M V R L T Y K E G I E M L R A A G K E I G D F E D L S T E N E K F L G K L V R D K Y D T D F Y I L D K F P L E I R P F Y T M P D P A N P K Y S N S Y D F F M R G E E I L S G A Q R I H D H A L L Q E R M K A H G L S P E D P G L K D Y C D G F S Y G C P P H A G G G I G L E R V V M F Y L D L K N I R R A S L F P R D P K R L R P
Chain: R, Molecule: T-RNA (75-MER)
U C C G U G A U A G U U PSU A A H2U G G H2U C A G A A U G G G C G C PSU U G U C 1MG C G U G C C A G A U 5MC G G G G 5MU PSU C A A U U C C C C G U C G C G G A G C C A
Chain: S, Molecule: T-RNA (75-MER)
U C C G U G A U A G U U PSU A A H2U G G H2U C A G A A U G G G C G C PSU U G U C 1MG C G U G C C A G A U 5MC G G G G 5MU PSU C A A U U C C C C G U C G C G G A G C C A


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